Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | DC425_09420 | Not Available | Positive | 2079050 - 2080390 | 46147.6 |
| hypothetical protein | DC425_09425 | Not Available | Positive | 2080407 - 2080640 | 8217.39 |
| acyl-coa thioesterase | DC425_09430 | Not Available | Positive | 2080637 - 2081023 | 13527.2 |
| dihydrolipoyl dehydrogenase | DC425_09435 | Not Available | Positive | 2081071 - 2082465 | 49645.2 |
| hypothetical protein | DC425_09440 | Not Available | Positive | 2082604 - 2084013 | 49404.4 |
| dna-binding protein | DC425_09445 | Not Available | Positive | 2084043 - 2084414 | 13970.2 |
| diguanylate cyclase | DC425_09450 | Not Available | Negative | 2084417 - 2086774 | 84991.7 |
| fatty acyl-amp ligase | DC425_09455 | Not Available | Negative | 2086850 - 2088619 | 64151.1 |
| recx family transcriptional regulator | DC425_09460 | Not Available | Positive | 2088718 - 2089281 | 20475.6 |
| cold-shock protein | DC425_09465 | Not Available | Positive | 2089366 - 2090025 | 23668.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
