Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_09370 | Not Available | Positive | 2069522 - 2070760 | 44036.4 |
| cytidine deaminase | DC425_09375 | Not Available | Negative | 2070820 - 2071272 | 14928.8 |
| glycosyl hydrolase | DC425_09380 | Not Available | Negative | 2071269 - 2071946 | 24643.6 |
| upf0262 family protein | DC425_09385 | Not Available | Negative | 2071946 - 2072428 | 18334.8 |
| replicative dna helicase | DC425_09390 | Not Available | Positive | 2072503 - 2073996 | 54182.1 |
| murein l,d-transpeptidase | DC425_09395 | Not Available | Positive | 2074214 - 2075641 | 51172.3 |
| hypothetical protein | DC425_09400 | Not Available | Positive | 2075678 - 2075989 | 10329.0 |
| d-alanyl-d-alanine carboxypeptidase | DC425_09405 | Not Available | Positive | 2076004 - 2076855 | 30203.5 |
| peptidase m28 | DC425_09410 | Not Available | Negative | 2076871 - 2078163 | 45529.8 |
| universal stress protein | DC425_09415 | Not Available | Negative | 2078484 - 2078939 | 15496.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
