Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | DC425_09320 | Not Available | Positive | 2061717 - 2063258 | 55313.8 |
| methionine adenosyltransferase | DC425_09325 | Not Available | Positive | 2063301 - 2064518 | 43315.0 |
| pilz domain-containing protein | DC425_09330 | Not Available | Negative | 2064610 - 2064951 | 12692.3 |
| hypothetical protein | DC425_09335 | Not Available | Negative | 2065034 - 2065318 | 9652.86 |
| formate transporter | DC425_09340 | Not Available | Negative | 2065396 - 2066208 | 28190.4 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DC425_09345 | Not Available | Positive | 2066307 - 2066987 | 25762.9 |
| d-alanyl-d-alanine carboxypeptidase | DC425_09350 | Not Available | Negative | 2066991 - 2067812 | 29108.8 |
| rna pseudouridine synthase | DC425_09355 | Not Available | Positive | 2067807 - 2068463 | 23683.4 |
| aminoacyl-trna hydrolase | DC425_09360 | Not Available | Positive | 2068474 - 2068899 | 15761.1 |
| hypothetical protein | DC425_09365 | Not Available | Positive | 2068928 - 2069410 | 16879.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
