Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_09020 | Not Available | Positive | 1994714 - 1995253 | 19341.1 |
| hypothetical protein | DC425_09025 | Not Available | Positive | 1995250 - 1995516 | 9697.01 |
| hslu--hslv peptidase proteolytic subunit | DC425_09030 | Not Available | Positive | 1995772 - 1996317 | 19545.5 |
| hslu--hslv peptidase atpase subunit | DC425_09035 | Not Available | Positive | 1996385 - 1997677 | 47281.7 |
| dna mismatch repair protein muts | DC425_09040 | Not Available | Negative | 1997898 - 2000477 | 90108.5 |
| type ii toxin-antitoxin system rele/pare family toxin | DC425_09045 | Not Available | Negative | 2000504 - 2000776 | 10150.1 |
| hypothetical protein | DC425_09050 | Not Available | Negative | 2000769 - 2000957 | 6845.97 |
| nadp-dependent malic enzyme | DC425_09055 | Not Available | Positive | 2001048 - 2003306 | 81447.2 |
| hypothetical protein | DC425_09060 | Not Available | Positive | 2003406 - 2004668 | 44158.5 |
| 3-oxoacyl-acp reductase | DC425_09065 | Not Available | Negative | 2004726 - 2005514 | 27413.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
