Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-deoxy-d-gluconate 3-dehydrogenase | DC425_08365 | Not Available | Positive | 1819469 - 1820221 | 25833.9 |
| 2-keto-3-deoxygluconate kinase | DC425_08370 | Not Available | Positive | 1820218 - 1821228 | 35444.0 |
| carboxylesterase | DC425_08375 | Not Available | Positive | 1821215 - 1822774 | 55760.4 |
| tonb-dependent receptor | DC425_08380 | Not Available | Positive | 1823018 - 1826053 | 108032.0 |
| alpha/beta hydrolase | DC425_08385 | Not Available | Positive | 1826164 - 1827093 | 32965.4 |
| methionine synthase | DC425_08390 | Not Available | Negative | 1827156 - 1828256 | 40614.4 |
| duf1852 domain-containing protein | DC425_08395 | Not Available | Negative | 1828213 - 1829199 | 36970.4 |
| glycerophosphodiester phosphodiesterase | DC425_08400 | Not Available | Negative | 1829623 - 1830561 | 33492.8 |
| tonb-dependent receptor | DC425_08405 | Not Available | Negative | 1830643 - 1833144 | 89862.6 |
| rok family protein | DC425_08410 | Not Available | Negative | 1833235 - 1834449 | 43500.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
