Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DC425_08315 | Not Available | Negative | 1809676 - 1810644 | 33876.8 |
| rhamnogalacturonan acetylesterase | DC425_08320 | Not Available | Negative | 1810646 - 1811887 | 44189.6 |
| hypothetical protein | DC425_08325 | Not Available | Negative | 1811875 - 1812693 | 29042.7 |
| transcriptional regulator | DC425_08330 | Not Available | Negative | 1812795 - 1813589 | 28928.2 |
| short-chain dehydrogenase | DC425_08335 | Not Available | Negative | 1813811 - 1814575 | 26385.8 |
| l-rhamnonate dehydratase | DC425_08340 | Not Available | Positive | 1814712 - 1815899 | 43989.8 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DC425_08345 | Not Available | Positive | 1815910 - 1816773 | 30650.9 |
| 3-oxoacyl-acp reductase | DC425_08350 | Not Available | Positive | 1816770 - 1817519 | 25482.3 |
| amidohydrolase | DC425_08355 | Not Available | Positive | 1817533 - 1818480 | 34361.5 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DC425_08360 | Not Available | Positive | 1818480 - 1819322 | 30968.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
