Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | DC425_07660 | Not Available | Negative | 1650848 - 1651612 | 26312.4 |
| response regulator | DC425_07665 | Not Available | Negative | 1651710 - 1652060 | 12215.7 |
| hybrid sensor histidine kinase/response regulator | DC425_07670 | Not Available | Negative | 1652118 - 1654499 | 83898.8 |
| peptidase m13 | DC425_07675 | Not Available | Negative | 1654731 - 1656752 | 73323.9 |
| peptidase m13 | DC425_07680 | Not Available | Negative | 1656922 - 1658985 | 75233.4 |
| duf2062 domain-containing protein | DC425_07685 | Not Available | Negative | 1659061 - 1659624 | 20833.6 |
| ssra-binding protein smpb | DC425_07690 | Not Available | Negative | 1659645 - 1660127 | 18243.9 |
| hypothetical protein | DC425_07695 | Not Available | Positive | 1660215 - 1660721 | 18136.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DC425_07700 | Not Available | Negative | 1660718 - 1661602 | 30845.7 |
| lytic transglycosylase | DC425_07705 | Not Available | Positive | 1661682 - 1663706 | 72101.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
