Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DC425_07610 | Not Available | Positive | 1641798 - 1642130 | 11651.7 |
| peptide deformylase | DC425_07615 | Not Available | Negative | 1642153 - 1642671 | 19407.3 |
| recombination protein recr | DC425_07620 | Not Available | Negative | 1642725 - 1643321 | 21354.8 |
| methionyl-trna formyltransferase | DC425_07625 | Not Available | Positive | 1643374 - 1644288 | 31989.7 |
| trna pseudouridine(38-40) synthase trua | DC425_07630 | Not Available | Positive | 1644285 - 1645022 | 26768.2 |
| rna methyltransferase | DC425_07635 | Not Available | Negative | 1645169 - 1646374 | 42805.1 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DC425_07640 | Not Available | Negative | 1646371 - 1647762 | 46966.5 |
| hypothetical protein | DC425_07645 | Not Available | Negative | 1647759 - 1648142 | 13268.6 |
| dihydroxy-acid dehydratase | DC425_07650 | Not Available | Negative | 1648168 - 1649886 | 60133.1 |
| glycosidase | DC425_07655 | Not Available | Negative | 1649930 - 1650844 | 33187.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
