Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein-ubiquinone oxidoreductase | DC425_07205 | Not Available | Negative | 1548356 - 1550008 | 60456.2 |
| uracil-dna glycosylase | DC425_07210 | Not Available | Positive | 1550143 - 1550877 | 26041.4 |
| lytic transglycosylase | DC425_07215 | Not Available | Positive | 1550913 - 1552718 | 64645.7 |
| long-chain fatty acid--coa ligase | DC425_07220 | Not Available | Positive | 1553167 - 1554756 | 57721.8 |
| hypothetical protein | DC425_07225 | Not Available | Negative | 1554771 - 1555046 | 10130.0 |
| sodium:proton exchanger | DC425_07230 | Not Available | Positive | 1555089 - 1556873 | 62262.1 |
| duf488 domain-containing protein | DC425_07235 | Not Available | Negative | 1556864 - 1557298 | 15534.7 |
| fadh(2)-oxidizing methylenetetrahydrofolate--trna-(uracil(54)-c(5))- methyltransferase trmfo | DC425_07240 | Not Available | Positive | 1557366 - 1558733 | 49417.9 |
| histidine kinase | DC425_07245 | Not Available | Negative | 1558666 - 1559136 | 16733.6 |
| hypothetical protein | DC425_07250 | Not Available | Negative | 1559196 - 1559852 | 23218.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
