Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_07155 | Not Available | Negative | 1536018 - 1536542 | 19039.5 |
| alanine--trna ligase | DC425_07160 | Not Available | Negative | 1536680 - 1539337 | 94120.4 |
| phytanoyl-coa dioxygenase | DC425_07165 | Not Available | Negative | 1539372 - 1540040 | 24081.9 |
| peptidase | DC425_07170 | Not Available | Negative | 1540037 - 1541296 | 45039.2 |
| dicarboxylate/amino acid:cation symporter | DC425_07175 | Not Available | Positive | 1541369 - 1542682 | 45757.3 |
| glutathione s-transferase | DC425_07180 | Not Available | Negative | 1542692 - 1543321 | 23376.6 |
| class i sam-dependent methyltransferase | DC425_07185 | Not Available | Negative | 1543318 - 1544154 | 29125.1 |
| recombinase reca | DC425_07190 | Not Available | Negative | 1544534 - 1545607 | 38453.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DC425_07195 | Not Available | Negative | 1545941 - 1546771 | 28212.7 |
| hypothetical protein | DC425_07200 | Not Available | Negative | 1546768 - 1548264 | 51389.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
