Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DC425_06955 | Not Available | Negative | 1486866 - 1487387 | 18241.8 |
| nucleoside-diphosphate kinase | DC425_06960 | Not Available | Negative | 1487387 - 1487809 | 15427.3 |
| dna polymerase iii subunit chi | DC425_06965 | Not Available | Negative | 1487897 - 1488337 | 16434.2 |
| leucyl aminopeptidase | DC425_06970 | Not Available | Negative | 1488393 - 1489865 | 50837.5 |
| lps-assembly protein lptd | DC425_06975 | Not Available | Positive | 1490027 - 1492279 | 82930.9 |
| peptidylprolyl isomerase | DC425_06980 | Not Available | Positive | 1492363 - 1493730 | 49674.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DC425_06985 | Not Available | Positive | 1493732 - 1494727 | 34014.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DC425_06990 | Not Available | Positive | 1494724 - 1495578 | 29896.2 |
| hypothetical protein | DC425_06995 | Not Available | Negative | 1495575 - 1496075 | 17200.8 |
| rna methyltransferase | DC425_07000 | Not Available | Negative | 1496107 - 1497279 | 40461.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
