Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | DC425_06905 | Not Available | Negative | 1476673 - 1478910 | 81089.5 |
| nitrogen regulation protein nr(i) | DC425_06910 | Not Available | Negative | 1479016 - 1480431 | 51161.6 |
| two-component sensor histidine kinase | DC425_06915 | Not Available | Negative | 1480428 - 1481471 | 37011.8 |
| trna dihydrouridine synthase dusb | DC425_06920 | Not Available | Negative | 1481479 - 1482495 | 36994.8 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DC425_06925 | Not Available | Positive | 1482577 - 1483701 | 38977.8 |
| hypothetical protein | DC425_06930 | Not Available | Positive | 1483698 - 1484219 | 18480.6 |
| cina family protein | DC425_06935 | Not Available | Positive | 1484216 - 1484719 | 16948.3 |
| ubiquinone-binding protein | DC425_06940 | Not Available | Negative | 1484680 - 1485138 | 17337.7 |
| lipoyl synthase | DC425_06945 | Not Available | Negative | 1485131 - 1486054 | 33882.9 |
| carbonate dehydratase | DC425_06950 | Not Available | Positive | 1486197 - 1486826 | 22746.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
