Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_06305 | Not Available | Positive | 1331051 - 1332121 | 39284.1 |
| malate dehydrogenase | DC425_06310 | Not Available | Positive | 1332242 - 1333204 | 33061.1 |
| succinate--coa ligase subunit alpha | DC425_06315 | Not Available | Positive | 1333291 - 1334175 | 29939.2 |
| 2-oxoglutarate dehydrogenase e1 component | DC425_06320 | Not Available | Positive | 1334329 - 1337301 | 109164.0 |
| dihydrolipoamide succinyltransferase | DC425_06325 | Not Available | Positive | 1337350 - 1338594 | 42838.5 |
| dihydrolipoyl dehydrogenase | DC425_06330 | Not Available | Positive | 1338705 - 1340096 | 48245.2 |
| gcn5-related n-acetyltransferase | DC425_06335 | Not Available | Positive | 1340096 - 1340482 | 14122.8 |
| choline dehydrogenase | DC425_06340 | Not Available | Negative | 1340564 - 1342183 | 57908.0 |
| tetr/acrr family transcriptional regulator | DC425_06345 | Not Available | Negative | 1342150 - 1342785 | 23324.9 |
| trehalase | DC425_06350 | Not Available | Negative | 1342802 - 1344343 | 56943.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
