Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | DC425_06000 | Not Available | Positive | 1263715 - 1264395 | 23259.1 |
| hypothetical protein | DC425_06005 | Not Available | Positive | 1264461 - 1265936 | 51702.7 |
| duf2497 domain-containing protein | DC425_06010 | Not Available | Positive | 1265983 - 1266603 | 22458.0 |
| amp nucleosidase | DC425_06015 | Not Available | Positive | 1266698 - 1268134 | 53208.3 |
| hypothetical protein | DC425_06020 | Not Available | Positive | 1268223 - 1268777 | 18461.8 |
| histidine kinase | DC425_06025 | Not Available | Positive | 1268897 - 1271248 | 84335.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DC425_06030 | Not Available | Positive | 1271394 - 1271843 | 15755.9 |
| aminoglycoside phosphotransferase | DC425_06035 | Not Available | Positive | 1271819 - 1272805 | 35822.5 |
| mannose-1-phosphate guanylyltransferase | DC425_06040 | Not Available | Positive | 1272802 - 1273557 | 27391.0 |
| double-strand break repair protein addb | DC425_06045 | Not Available | Positive | 1273618 - 1276617 | 107332.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
