Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | DC425_05950 | Not Available | Negative | 1256206 - 1257309 | 37967.7 |
| shikimate kinase | DC425_05955 | Not Available | Negative | 1257306 - 1257875 | 20387.7 |
| hypothetical protein | DC425_05960 | Not Available | Positive | 1258098 - 1259924 | 62707.8 |
| recombinase xerd | DC425_05965 | Not Available | Positive | 1259936 - 1260844 | 32279.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DC425_05970 | Not Available | Positive | 1260878 - 1261825 | 33871.8 |
| flp family type ivb pilin | DC425_05975 | Not Available | Negative | 1262064 - 1262231 | 5660.09 |
| flp family type ivb pilin | DC425_05980 | Not Available | Negative | 1262374 - 1262574 | 7078.98 |
| 8-oxo-dgtp diphosphatase mutt | DC425_05985 | Not Available | Positive | 1262606 - 1263064 | 16331.8 |
| Trna-cys | Not Available | Not Available | Positive | 1263107 - 1263180 | Not Available |
| hypothetical protein | DC425_05995 | Not Available | Negative | 1263212 - 1263556 | 12860.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
