Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | DC425_05900 | Not Available | Positive | 1246362 - 1246979 | 22823.2 |
| duf2218 domain-containing protein | DC425_05905 | Not Available | Positive | 1246979 - 1247269 | 10832.8 |
| glycosyl transferase family 1 | DC425_05910 | Not Available | Negative | 1247654 - 1248826 | 42778.1 |
| dna repair protein rada | DC425_05915 | Not Available | Positive | 1249077 - 1250450 | 47926.9 |
| colicin v production protein | DC425_05920 | Not Available | Positive | 1250847 - 1251434 | 20151.9 |
| iron-sulfur cluster assembly scaffold protein | DC425_05925 | Not Available | Positive | 1251431 - 1251868 | 15328.0 |
| sodium:proton exchanger | DC425_05930 | Not Available | Positive | 1251861 - 1253627 | 63080.1 |
| duf423 domain-containing protein | DC425_05935 | Not Available | Positive | 1253624 - 1253953 | 11065.8 |
| hypothetical protein | DC425_05940 | Not Available | Negative | 1254082 - 1255842 | 62571.6 |
| duf2256 domain-containing protein | DC425_05945 | Not Available | Negative | 1256066 - 1256206 | 5455.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
