Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | DCP16_02650 | Not Available | Negative | 538665 - 539144 | 17208.6 |
| redox-regulated atpase ychf | DCP16_02655 | Not Available | Negative | 539488 - 540591 | 39758.6 |
| exopolysaccharide biosynthesis protein | DCP16_02660 | Not Available | Negative | 540710 - 541330 | 21897.0 |
| aminoacyl-trna hydrolase | DCP16_02665 | Not Available | Negative | 541484 - 542200 | 25764.3 |
| abc transporter substrate-binding protein | DCP16_02670 | Not Available | Negative | 542288 - 542974 | 25903.0 |
| diguanylate cyclase | DCP16_02675 | Not Available | Negative | 543037 - 545433 | 88753.5 |
| 50s ribosomal protein l25 | DCP16_02680 | Not Available | Negative | 545710 - 546339 | 22884.2 |
| sigma-54-dependent fis family transcriptional regulator | DCP16_02685 | Not Available | Positive | 546622 - 547581 | 34731.1 |
| aldehyde dehydrogenase | DCP16_02690 | Not Available | Positive | 547741 - 549258 | 55375.2 |
| glycosyltransferase | DCP16_02695 | Not Available | Positive | 549488 - 551002 | 54837.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
