Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipyl-coa thiolase | DC425_05335 | Not Available | Positive | 1111941 - 1113143 | 41314.0 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | DC425_05340 | Not Available | Negative | 1113166 - 1116777 | 127277.0 |
| arsr family transcriptional regulator | DC425_05345 | Not Available | Positive | 1116890 - 1117363 | 17827.6 |
| peptidase m28 | DC425_05350 | Not Available | Positive | 1117402 - 1119024 | 57501.8 |
| carbohydrate porin | DC425_05355 | Not Available | Negative | 1119064 - 1120443 | 48767.2 |
| manganese transporter | DC425_05360 | Not Available | Negative | 1120469 - 1122124 | 58020.6 |
| transcriptional regulator | DC425_05365 | Not Available | Positive | 1122603 - 1122881 | 10413.5 |
| nad-dependent dehydratase | DC425_05370 | Not Available | Negative | 1123027 - 1124088 | 38773.8 |
| transcriptional regulator | DC425_05375 | Not Available | Positive | 1124180 - 1124560 | 14083.0 |
| pas domain s-box protein | DC425_05380 | Not Available | Negative | 1124820 - 1125485 | 24441.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
