Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | DC425_05185 | Not Available | Positive | 1080467 - 1081198 | 25862.3 |
| ribosome recycling factor | DC425_05190 | Not Available | Positive | 1081202 - 1081759 | 20199.2 |
| isoprenyl transferase | DC425_05195 | Not Available | Positive | 1081833 - 1082570 | 26560.9 |
| phosphatidate cytidylyltransferase | DC425_05200 | Not Available | Positive | 1082567 - 1083364 | 27496.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DC425_05205 | Not Available | Positive | 1083361 - 1084548 | 41505.9 |
| rip metalloprotease rsep | DC425_05210 | Not Available | Positive | 1084586 - 1085695 | 39344.4 |
| outer membrane protein assembly factor bama | DC425_05215 | Not Available | Positive | 1085779 - 1088529 | 101019.0 |
| hypothetical protein | DC425_05220 | Not Available | Positive | 1088529 - 1089239 | 24421.8 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DC425_05225 | Not Available | Positive | 1089273 - 1089722 | 15912.9 |
| 50s ribosomal protein l31 | DC425_05230 | Not Available | Positive | 1089826 - 1090059 | 8588.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
