Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | DC425_05085 | Not Available | Positive | 1061292 - 1061555 | 9309.41 |
| chromosomal replication initiator protein dnaa | DC425_05090 | Not Available | Positive | 1061987 - 1063411 | 52645.7 |
| tryptophan--trna ligase | DC425_05095 | Not Available | Negative | 1063790 - 1064821 | 37361.9 |
| murein biosynthesis integral membrane protein murj | DC425_05100 | Not Available | Negative | 1064831 - 1066408 | 55736.4 |
| protein-export chaperone secb | DC425_05105 | Not Available | Negative | 1066434 - 1066943 | 18008.2 |
| preprotein translocase subunit tim44 | DC425_05110 | Not Available | Positive | 1067177 - 1067806 | 22479.3 |
| hypothetical protein | DC425_05115 | Not Available | Positive | 1067947 - 1069296 | 46707.5 |
| dna mismatch repair protein muts | DC425_05120 | Not Available | Positive | 1069322 - 1069840 | 17987.9 |
| succinyl-diaminopimelate desuccinylase | DC425_05125 | Not Available | Negative | 1069926 - 1071047 | 38711.3 |
| glutathione s-transferase | DC425_05130 | Not Available | Negative | 1071044 - 1071706 | 24921.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
