Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | DC425_04885 | Not Available | Negative | 1015269 - 1017497 | 81162.0 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | DC425_04890 | Not Available | Negative | 1017779 - 1018498 | 26095.3 |
| peptidase m16 | DC425_04895 | Not Available | Positive | 1018681 - 1021554 | 102648.0 |
| hypothetical protein | DC425_04900 | Not Available | Negative | 1021572 - 1022684 | 38452.4 |
| long-chain fatty acid--coa ligase | DC425_04905 | Not Available | Negative | 1022665 - 1024452 | 65281.7 |
| gamma-glutamyltransferase | DC425_04910 | Not Available | Negative | 1024520 - 1026157 | 56556.8 |
| dihydroorotate dehydrogenase (quinone) | DC425_04915 | Not Available | Negative | 1026324 - 1027361 | 35387.8 |
| suf system fe-s cluster assembly regulator | DC425_04920 | Not Available | Positive | 1027791 - 1028237 | 15102.3 |
| fe-s cluster assembly protein sufb | DC425_04925 | Not Available | Positive | 1028241 - 1029716 | 54515.4 |
| fe-s cluster assembly atpase sufc | DC425_04930 | Not Available | Positive | 1029975 - 1030718 | 26732.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
