Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5076 domain-containing protein | DC425_04735 | Not Available | Positive | 989279 - 989596 | 11421.6 |
| succinyl-coa--3-ketoacid-coa transferase | DC425_04740 | Not Available | Positive | 989596 - 990237 | 22694.4 |
| alpha/beta hydrolase | DC425_04745 | Not Available | Positive | 990276 - 991163 | 31210.8 |
| glutathione s-transferase | DC425_04750 | Not Available | Positive | 991160 - 991843 | 24966.3 |
| 3-isopropylmalate dehydratase large subunit | DC425_04755 | Not Available | Positive | 991904 - 993340 | 50698.3 |
| 3-isopropylmalate dehydratase small subunit | DC425_04760 | Not Available | Positive | 993454 - 994083 | 22526.8 |
| nadph:quinone oxidoreductase | DC425_04765 | Not Available | Positive | 994055 - 995044 | 34440.4 |
| duf1476 domain-containing protein | DC425_04770 | Not Available | Positive | 995424 - 995747 | 12104.3 |
| bola family transcriptional regulator | DC425_04775 | Not Available | Positive | 995756 - 995986 | 7812.39 |
| grx4 family monothiol glutaredoxin | DC425_04780 | Not Available | Positive | 995998 - 996324 | 11700.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
