Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3772 domain-containing protein | DC425_04480 | Not Available | Negative | 932936 - 935302 | 82836.5 |
| 3-oxoacyl-acp reductase | DC425_04485 | Not Available | Negative | 935583 - 936365 | 28001.3 |
| fumarylacetoacetate hydrolase | DC425_04490 | Not Available | Negative | 936362 - 937504 | 40269.8 |
| 30s ribosomal protein s21 | DC425_04495 | Not Available | Positive | 937732 - 937938 | 8243.09 |
| peptidylprolyl isomerase | DC425_04500 | Not Available | Positive | 938048 - 938635 | 20657.4 |
| metal transporter | DC425_04505 | Not Available | Negative | 938944 - 940365 | 48578.9 |
| cusa/czca family heavy metal efflux rnd transporter | DC425_04510 | Not Available | Negative | 940362 - 943562 | 114583.0 |
| efflux rnd transporter periplasmic adaptor subunit | DC425_04515 | Not Available | Negative | 943559 - 944821 | 43552.0 |
| dna-binding response regulator | DC425_04520 | Not Available | Positive | 944908 - 945582 | 24247.4 |
| hypothetical protein | DC425_04525 | Not Available | Positive | 945579 - 946931 | 47806.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
