Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septation protein a | DC425_04380 | Not Available | Negative | 911889 - 912569 | 24687.7 |
| signal recognition particle-docking protein ftsy | DC425_04385 | Not Available | Negative | 912814 - 913752 | 32840.7 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DC425_04390 | Not Available | Negative | 913749 - 914987 | 43608.5 |
| duf924 domain-containing protein | DC425_04395 | Not Available | Positive | 915028 - 915561 | 19810.2 |
| signal recognition particle protein | DC425_04400 | Not Available | Positive | 916100 - 917596 | 52493.9 |
| 30s ribosomal protein s16 | DC425_04405 | Not Available | Positive | 917713 - 918126 | 14950.5 |
| 16s rrna processing protein rimm | DC425_04410 | Not Available | Positive | 918290 - 918817 | 18577.9 |
| thioredoxin reductase | DC425_04415 | Not Available | Negative | 918972 - 919919 | 33434.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | DC425_04420 | Not Available | Positive | 919952 - 920215 | 9723.98 |
| pin domain nuclease | DC425_04425 | Not Available | Positive | 920212 - 920589 | 13921.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
