Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyhypusine synthase | DC425_04175 | Not Available | Negative | 877365 - 878447 | 39520.1 |
| decarboxylase | DC425_04180 | Not Available | Negative | 878566 - 879735 | 42480.7 |
| pyridoxal-5'-phosphate-dependent protein | DC425_04185 | Not Available | Positive | 879980 - 880909 | 31941.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DC425_04190 | Not Available | Negative | 880958 - 881641 | 24883.5 |
| fad-dependent oxidoreductase | DC425_04195 | Not Available | Negative | 881651 - 883060 | 49254.8 |
| rna polymerase sigma factor rpoh | DC425_04200 | Not Available | Negative | 883062 - 883964 | 34018.9 |
| rlua family pseudouridine synthase | DC425_04205 | Not Available | Negative | 884028 - 884975 | 33960.1 |
| hypothetical protein | DC425_04210 | Not Available | Positive | 884996 - 885397 | 13810.4 |
| histidine phosphotransferase | DC425_04215 | Not Available | Positive | 885584 - 886228 | 22765.3 |
| chemotaxis protein chea | DC425_04220 | Not Available | Positive | 886307 - 888598 | 81784.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
