Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspa | DC425_04125 | Not Available | Positive | 866451 - 867887 | 51395.0 |
| polysaccharide deacetylase family protein | DC425_04130 | Not Available | Positive | 867877 - 868731 | 31366.1 |
| femab family pep-cterm system-associated protein | DC425_04135 | Not Available | Positive | 868731 - 869774 | 37189.6 |
| tigr03087 family pep-cterm/xrta system glycosyltransferase | DC425_04140 | Not Available | Positive | 869774 - 870928 | 40301.6 |
| epsi domain-containing exosortase | DC425_04145 | Not Available | Positive | 870925 - 872421 | 53242.6 |
| asparagine synthetase b | DC425_04150 | Not Available | Positive | 872421 - 874307 | 68506.0 |
| hypothetical protein | DC425_04155 | Not Available | Positive | 874385 - 875695 | 45071.9 |
| hypothetical protein | DC425_04160 | Not Available | Negative | 875699 - 875884 | 6861.38 |
| hypothetical protein | DC425_04165 | Not Available | Negative | 875884 - 876309 | 15359.2 |
| oxidoreductase | DC425_04170 | Not Available | Positive | 876421 - 877194 | 27884.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
