Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | DC425_03870 | Not Available | Positive | 809477 - 810958 | 51428.2 |
| hypothetical protein | DC425_03875 | Not Available | Positive | 810949 - 811368 | 15208.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | DC425_03880 | Not Available | Positive | 811365 - 812831 | 52851.8 |
| aldehyde-activating protein | DC425_03885 | Not Available | Positive | 812831 - 813229 | 14490.2 |
| peptidylprolyl isomerase | DC425_03890 | Not Available | Positive | 813424 - 814017 | 20482.6 |
| hypothetical protein | DC425_03895 | Not Available | Negative | 814151 - 814402 | 8908.72 |
| Trna-leu | Not Available | Not Available | Positive | 814718 - 814802 | Not Available |
| trigger factor | DC425_03905 | Not Available | Positive | 814874 - 816565 | 60711.4 |
| glycosyl transferase | DC425_03910 | Not Available | Positive | 816764 - 817696 | 33640.9 |
| atp-dependent clp protease proteolytic subunit | DC425_03915 | Not Available | Positive | 817752 - 818441 | 25203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
