Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate hydrolase | DC425_03520 | Not Available | Negative | 717433 - 718932 | 50961.6 |
| laci family transcriptional regulator | DC425_03525 | Not Available | Positive | 719046 - 720074 | 37538.2 |
| glucuronate isomerase | DC425_03530 | Not Available | Positive | 720154 - 721602 | 53600.0 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DC425_03535 | Not Available | Positive | 721605 - 722447 | 30996.8 |
| 2-deoxy-d-gluconate 3-dehydrogenase | DC425_03540 | Not Available | Positive | 722594 - 723346 | 25833.9 |
| tonb-dependent siderophore receptor | DC425_03545 | Not Available | Negative | 723366 - 725438 | 75035.3 |
| 1,4-beta-d-glucan glucohydrolase | DC425_03550 | Not Available | Positive | 725627 - 728104 | 86834.2 |
| cytochrome ubiquinol oxidase subunit ii | DC425_03555 | Not Available | Positive | 728212 - 729078 | 31702.7 |
| cytochrome ubiquinol oxidase subunit i | DC425_03560 | Not Available | Positive | 729075 - 731174 | 77301.5 |
| cytochrome o ubiquinol oxidase subunit iii | DC425_03565 | Not Available | Positive | 731171 - 731797 | 22661.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
