Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DC425_03470 | Not Available | Positive | 699776 - 700516 | 25300.1 |
| eama/rhat family transporter | DC425_03475 | Not Available | Negative | 700669 - 701565 | 30137.0 |
| pectate lyase | DC425_03480 | Not Available | Negative | 701744 - 702853 | 39921.8 |
| tonb-dependent receptor | DC425_03485 | Not Available | Positive | 703527 - 707057 | 126669.0 |
| xylan 1,4-beta-xylosidase | DC425_03490 | Not Available | Positive | 707191 - 708795 | 59016.4 |
| duf885 domain-containing protein | DC425_03495 | Not Available | Negative | 708815 - 710005 | 42456.2 |
| hypothetical protein | DC425_03500 | Not Available | Negative | 710002 - 713805 | 139205.0 |
| mfs transporter | DC425_03505 | Not Available | Negative | 713802 - 715088 | 46344.8 |
| 2-keto-4-pentenoate hydratase | DC425_03510 | Not Available | Negative | 715148 - 715927 | 27375.2 |
| mannitol dehydrogenase | DC425_03515 | Not Available | Negative | 716006 - 717436 | 49985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
