Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ku protein | DC425_03370 | Not Available | Negative | 678808 - 679683 | 32317.9 |
| pyridoxamine 5'-phosphate oxidase | DC425_03375 | Not Available | Positive | 679805 - 680383 | 21775.3 |
| cation diffusion facilitator family transporter | DC425_03380 | Not Available | Positive | 680380 - 681333 | 34538.5 |
| phzf family phenazine biosynthesis protein | DC425_03385 | Not Available | Positive | 681333 - 682130 | 28043.2 |
| hypothetical protein | DC425_03390 | Not Available | Negative | 682022 - 682318 | 10374.9 |
| excinuclease abc subunit b | DC425_03395 | Not Available | Negative | 682267 - 682521 | 8913.74 |
| trna 2-thiouridine(34) synthase mnma | DC425_03400 | Not Available | Negative | 682518 - 683630 | 38878.2 |
| duf1153 domain-containing protein | DC425_03405 | Not Available | Positive | 684125 - 684424 | 11212.6 |
| glsb/yeaq/ymge family stress response membrane protein | DC425_03410 | Not Available | Positive | 684523 - 684780 | 8797.33 |
| hypothetical protein | DC425_03415 | Not Available | Negative | 685017 - 685751 | 25410.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
