Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | DC425_03220 | Not Available | Negative | 648826 - 649563 | 26158.3 |
| pantetheine-phosphate adenylyltransferase | DC425_03225 | Not Available | Negative | 649790 - 650296 | 18617.9 |
| farnesyl-diphosphate synthase | DC425_03230 | Not Available | Negative | 650342 - 651244 | 32018.7 |
| exodeoxyribonuclease vii small subunit | DC425_03235 | Not Available | Negative | 651249 - 651488 | 8778.29 |
| dna polymerase iii subunit beta | DC425_03240 | Not Available | Negative | 651556 - 652671 | 40329.6 |
| porin family protein | DC425_03245 | Not Available | Negative | 652867 - 653472 | 21410.9 |
| histidine phosphatase family protein | DC425_03250 | Not Available | Positive | 653609 - 654256 | 23089.7 |
| hypothetical protein | DC425_03255 | Not Available | Positive | 654253 - 654729 | 16085.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DC425_03260 | Not Available | Positive | 654747 - 655991 | 46103.8 |
| duf4126 domain-containing protein | DC425_03265 | Not Available | Positive | 656049 - 656507 | 15050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
