Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DCP16_02400 | Not Available | Positive | 484680 - 486908 | 80334.6 |
| extensin | DCP16_02405 | Not Available | Negative | 486977 - 487927 | 34282.4 |
| anthranilate synthase component i | DCP16_02410 | Not Available | Positive | 488224 - 490413 | 80687.2 |
| tigr02117 family protein | DCP16_02415 | Not Available | Positive | 490475 - 491194 | 25702.1 |
| amino acid transporter | DCP16_02420 | Not Available | Positive | 491328 - 491960 | 21668.3 |
| flavin-nucleotide-binding protein | DCP16_02425 | Not Available | Positive | 492048 - 492509 | 16969.2 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DCP16_02430 | Not Available | Positive | 492580 - 492975 | 14967.8 |
| cation transporter | DCP16_02435 | Not Available | Positive | 493102 - 494019 | 32340.5 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DCP16_02440 | Not Available | Positive | 494023 - 494487 | 16935.2 |
| duf2076 domain-containing protein | DCP16_02445 | Not Available | Negative | 494588 - 495385 | 27866.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
