Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | DC425_02970 | Not Available | Negative | 595988 - 596572 | 20878.2 |
| hypothetical protein | DC425_02975 | Not Available | Positive | 596707 - 597459 | 26445.6 |
| transglutaminase | DC425_02980 | Not Available | Positive | 597537 - 598316 | 27868.1 |
| hypothetical protein | DC425_02985 | Not Available | Positive | 598384 - 598671 | 10294.3 |
| hypothetical protein | DC425_02990 | Not Available | Positive | 599078 - 599629 | 20177.2 |
| extensin | DC425_02995 | Not Available | Negative | 599702 - 600442 | 26577.8 |
| nudix hydrolase | DC425_03000 | Not Available | Negative | 600439 - 601185 | 26189.3 |
| Trna-ala | Not Available | Not Available | Positive | 601253 - 601328 | Not Available |
| swfgd domain-containing protein | DC425_03010 | Not Available | Positive | 601563 - 602792 | 46267.2 |
| nadp-dependent oxidoreductase | DC425_03015 | Not Available | Positive | 602900 - 603892 | 35574.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
