Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | DC425_02670 | Not Available | Negative | 538225 - 539178 | 34255.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DC425_02675 | Not Available | Negative | 539305 - 540387 | 38511.0 |
| hypothetical protein | DC425_02680 | Not Available | Positive | 540438 - 541037 | 20824.6 |
| glycine cleavage system aminomethyltransferase gcvt | DC425_02685 | Not Available | Positive | 541539 - 542747 | 42323.7 |
| glycine cleavage system protein gcvh | DC425_02690 | Not Available | Positive | 542749 - 543120 | 13230.0 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | DC425_02695 | Not Available | Positive | 543228 - 544586 | 48573.8 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | DC425_02700 | Not Available | Positive | 544583 - 546154 | 55422.4 |
| hypothetical protein | DC425_02705 | Not Available | Positive | 546223 - 546726 | 18439.4 |
| sensor domain-containing diguanylate cyclase | DC425_02710 | Not Available | Negative | 546723 - 548180 | 52708.8 |
| recombinase xerc | DC425_02715 | Not Available | Positive | 548294 - 549163 | 30929.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
