Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1272 domain-containing protein | DC425_02340 | Not Available | Positive | 477637 - 477861 | 8217.84 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DC425_02345 | Not Available | Positive | 478430 - 479566 | 38557.4 |
| ribonuclease hii | DC425_02350 | Not Available | Positive | 479554 - 480222 | 23404.3 |
| modification methylase | DC425_02355 | Not Available | Positive | 480397 - 481551 | 42666.1 |
| dihydropteroate synthase | DC425_02360 | Not Available | Positive | 481726 - 482781 | 36236.8 |
| hypothetical protein | DC425_02365 | Not Available | Positive | 482859 - 483743 | 32677.1 |
| sigma-54-dependent fis family transcriptional regulator | DC425_02370 | Not Available | Negative | 483786 - 485207 | 50323.1 |
| aa3-type cytochrome c oxidase subunit iv | DC425_02375 | Not Available | Positive | 485383 - 485487 | 3650.69 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | DC425_02380 | Not Available | Positive | 485500 - 486624 | 38435.9 |
| pyridine nucleotide transhydrogenase | DC425_02385 | Not Available | Positive | 486810 - 487109 | 10357.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
