Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | DC425_01940 | Not Available | Negative | 400939 - 402363 | 49610.6 |
| gamma carbonic anhydrase family protein | DC425_01945 | Not Available | Positive | 402543 - 403076 | 17969.6 |
| alpha/beta hydrolase | DC425_01950 | Not Available | Negative | 403067 - 404032 | 33757.6 |
| 2fe-2s ferredoxin | DC425_01955 | Not Available | Negative | 404092 - 404448 | 12370.9 |
| maleylacetoacetate isomerase | DC425_01960 | Not Available | Negative | 404445 - 405074 | 22494.8 |
| homogentisate 1,2-dioxygenase | DC425_01965 | Not Available | Negative | 405071 - 406381 | 48185.9 |
| 4-hydroxyphenylpyruvate dioxygenase | DC425_01970 | Not Available | Negative | 406680 - 407765 | 39985.8 |
| marr family transcriptional regulator | DC425_01975 | Not Available | Positive | 407893 - 408321 | 15765.0 |
| tonb-dependent receptor | DC425_01980 | Not Available | Positive | 408444 - 411101 | 92339.9 |
| abc transporter permease | DC425_01985 | Not Available | Negative | 411098 - 412633 | 53570.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
