Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_01685 | Not Available | Negative | 355251 - 355547 | 10793.0 |
| post-segregation antitoxin ccda | DC425_01690 | Not Available | Negative | 355547 - 355792 | 9312.11 |
| hypothetical protein | DC425_01695 | Not Available | Positive | 355839 - 356039 | 6775.18 |
| p-ii family nitrogen regulator | DC425_01700 | Not Available | Positive | 356181 - 356519 | 11954.6 |
| ammonia channel protein | DC425_01705 | Not Available | Positive | 356530 - 357888 | 46115.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | DC425_01710 | Not Available | Negative | 358179 - 358598 | 14493.4 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DC425_01715 | Not Available | Negative | 358602 - 359741 | 41643.0 |
| riboflavin synthase | DC425_01720 | Not Available | Negative | 359731 - 360345 | 21973.1 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DC425_01725 | Not Available | Negative | 360330 - 361418 | 37469.9 |
| hypothetical protein | DC425_01730 | Not Available | Negative | 361415 - 361762 | 13485.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
