Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase accessory protein xdhc | DCP16_02250 | Not Available | Negative | 449088 - 449870 | 27706.7 |
| xanthine dehydrogenase molybdopterin binding subunit | DCP16_02255 | Not Available | Negative | 449929 - 452220 | 83548.2 |
| xanthine dehydrogenase small subunit | DCP16_02260 | Not Available | Negative | 452272 - 453741 | 53266.6 |
| 3-hydroxybutyrate dehydrogenase | DCP16_02265 | Not Available | Negative | 453802 - 454578 | 27311.9 |
| glycerol kinase | DCP16_02270 | Not Available | Positive | 454735 - 456228 | 54580.3 |
| llm class flavin-dependent oxidoreductase | DCP16_02275 | Not Available | Positive | 456373 - 457434 | 38665.4 |
| type i methionyl aminopeptidase | DCP16_02280 | Not Available | Positive | 457490 - 458242 | 27005.0 |
| peptide antibiotic transporter sbma | DCP16_02285 | Not Available | Positive | 458427 - 459701 | 48472.9 |
| polysaccharide deacetylase | DCP16_02290 | Not Available | Negative | 459865 - 460857 | 36595.2 |
| nnru family protein | DCP16_02295 | Not Available | Positive | 461155 - 461739 | 21619.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
