Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | DC425_00975 | Not Available | Negative | 196071 - 196814 | 26548.1 |
| hypothetical protein | DC425_00980 | Not Available | Negative | 196844 - 197383 | 19503.6 |
| atp-binding protein | DC425_00985 | Not Available | Positive | 197506 - 198969 | 52310.1 |
| duf4440 domain-containing protein | DC425_00990 | Not Available | Negative | 198976 - 199413 | 15826.0 |
| duf1294 domain-containing protein | DC425_00995 | Not Available | Negative | 199482 - 199772 | 10383.0 |
| duf2312 domain-containing protein | DC425_01000 | Not Available | Negative | 199825 - 200088 | 9954.07 |
| duf1244 domain-containing protein | DC425_01005 | Not Available | Negative | 200207 - 200653 | 16230.0 |
| pyruvate kinase | DC425_01010 | Not Available | Positive | 200672 - 202126 | 52194.9 |
| glycosyltransferase | DC425_01015 | Not Available | Positive | 202229 - 203248 | 37246.1 |
| sam-dependent methyltransferase | DC425_01020 | Not Available | Negative | 203383 - 204111 | 26460.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
