Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | DC425_00625 | Not Available | Negative | 126430 - 128928 | 92264.6 |
| duf3576 domain-containing protein | DC425_00630 | Not Available | Negative | 128990 - 129433 | 15791.2 |
| hypothetical protein | DC425_00635 | Not Available | Positive | 129699 - 130382 | 24076.4 |
| hypothetical protein | DC425_00640 | Not Available | Negative | 130607 - 131134 | 19015.5 |
| yggs family pyridoxal phosphate-dependent enzyme | DC425_00645 | Not Available | Positive | 131153 - 131845 | 23760.6 |
| haloacid dehalogenase | DC425_00650 | Not Available | Positive | 131842 - 132507 | 23291.5 |
| hypothetical protein | DC425_00655 | Not Available | Negative | 132571 - 133170 | 21424.8 |
| sco family protein | DC425_00660 | Not Available | Positive | 133231 - 133824 | 20626.9 |
| ycgn family cysteine cluster protein | DC425_00665 | Not Available | Positive | 133821 - 134249 | 16292.2 |
| metal-dependent hydrolase | DC425_00670 | Not Available | Positive | 134246 - 134920 | 24697.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
