Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | DC425_00575 | Not Available | Negative | 117531 - 118262 | 26287.9 |
| hypothetical protein | DC425_00580 | Not Available | Positive | 118326 - 118580 | 9343.35 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DC425_00585 | Not Available | Positive | 118580 - 119854 | 44376.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DC425_00590 | Not Available | Positive | 119909 - 121744 | 64980.6 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DC425_00595 | Not Available | Positive | 121741 - 122358 | 22739.3 |
| para family protein | DC425_00600 | Not Available | Positive | 122355 - 123137 | 27775.7 |
| chromosome partitioning protein parb | DC425_00605 | Not Available | Positive | 123134 - 124039 | 32328.7 |
| dienelactone hydrolase | DC425_00610 | Not Available | Positive | 124036 - 124779 | 27171.3 |
| dna polymerase iii subunit delta | DC425_00615 | Not Available | Negative | 124902 - 125921 | 35562.5 |
| hypothetical protein | DC425_00620 | Not Available | Negative | 125918 - 126433 | 18007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
