Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | DC425_00525 | Not Available | Negative | 109253 - 109948 | 25349.4 |
| dephospho-coa kinase | DC425_00530 | Not Available | Negative | 109956 - 110558 | 20932.2 |
| shikimate dehydrogenase | DC425_00535 | Not Available | Negative | 110570 - 111382 | 28744.5 |
| hypothetical protein | DC425_00540 | Not Available | Negative | 111379 - 111726 | 11739.1 |
| septum formation protein maf | DC425_00545 | Not Available | Negative | 111723 - 112316 | 21077.4 |
| kinase/pyrophosphorylase | DC425_00550 | Not Available | Negative | 112449 - 113258 | 29950.1 |
| uroporphyrinogen decarboxylase | DC425_00555 | Not Available | Positive | 113571 - 114590 | 35978.4 |
| hypothetical protein | DC425_00560 | Not Available | Positive | 114590 - 115036 | 16570.8 |
| transcription termination factor rho | DC425_00565 | Not Available | Positive | 115206 - 116462 | 46455.0 |
| hypothetical protein | DC425_00570 | Not Available | Positive | 116780 - 117496 | 24877.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
