Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 73259 - 73356 | Not Available |
| duf72 domain-containing protein | DC425_00380 | Not Available | Positive | 74614 - 75405 | 28951.3 |
| hypothetical protein | DC425_00385 | Not Available | Positive | 75466 - 75819 | 13090.5 |
| hypothetical protein | DC425_00390 | Not Available | Negative | 75921 - 76439 | 17853.2 |
| ubiquinol-cytochrome c chaperone | DC425_00395 | Not Available | Negative | 76436 - 76936 | 17844.6 |
| outer membrane protein assembly factor bame | DC425_00400 | Not Available | Positive | 77040 - 77612 | 19869.8 |
| penicillin-binding protein 1c | DC425_00405 | Not Available | Negative | 77859 - 79979 | 75219.2 |
| alpha-2-macroglobulin | DC425_00410 | Not Available | Negative | 80271 - 85991 | 201404.0 |
| glycosyl transferase family protein | DC425_00415 | Not Available | Positive | 86256 - 87626 | 49318.8 |
| hypothetical protein | DC425_00420 | Not Available | Positive | 87623 - 88624 | 33790.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
