Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_00070 | Not Available | Negative | 12845 - 13234 | 14004.1 |
| abrb family transcriptional regulator | DC425_00075 | Not Available | Negative | 13234 - 13476 | 8605.15 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DC425_00080 | Not Available | Negative | 13511 - 14638 | 40187.3 |
| hypothetical protein | DC425_00085 | Not Available | Positive | 14702 - 15865 | 42968.2 |
| isoaspartyl peptidase/l-asparaginase | DC425_00090 | Not Available | Positive | 15862 - 16779 | 31113.5 |
| hypothetical protein | DC425_00095 | Not Available | Positive | 16796 - 17833 | 37168.6 |
| hypothetical protein | DC425_00100 | Not Available | Positive | 17881 - 18741 | 31332.5 |
| toxin-antitoxin system hicb family antitoxin | DC425_00110 | Not Available | Negative | 19091 - 19306 | 7667.21 |
| hypothetical protein | DC425_00115 | Not Available | Negative | 19319 - 20215 | 32365.2 |
| peptidoglycan-associated lipoprotein pal | DC425_00120 | Not Available | Negative | 20439 - 20963 | 18448.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
