Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repa | DC425_16870 | Not Available | Negative | 3618660 - 3619517 | 31791.0 |
| Transposase | DC425_16875 | Not Available | Positive | 3619990 - 3621363 | 51399.8 |
| Dna invertase | DC425_16880 | Not Available | Negative | 3621387 - 3622031 | 22892.9 |
| hypothetical protein | DC425_16885 | Not Available | Negative | 3622383 - 3623018 | 20680.2 |
| Putative transposase orfb | DC425_16890 | Not Available | Positive | 3623084 - 3624255 | 44583.8 |
| Isrso12-transposase orfa protein | DC425_16895 | Not Available | Negative | 3624318 - 3624518 | 7870.62 |
| Transposase of is904h | DC425_16900 | Not Available | Positive | 3624599 - 3624934 | 13019.7 |
| Lysr family transcriptional regulator | DC425_16905 | Not Available | Positive | 3625031 - 3625933 | 33169.1 |
| lipopolysaccharide biosynthesis protein | DC425_00010 | Not Available | Positive | 664 - 2145 | 53016.6 |
| hypothetical protein | DC425_00015 | Not Available | Negative | 2166 - 2600 | 15460.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
