Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DCP16_02100 | Not Available | Positive | 418806 - 419675 | 32209.2 |
| transglutaminase family protein | DCP16_02105 | Not Available | Negative | 419826 - 420647 | 29936.4 |
| hypothetical protein | DCP16_02110 | Not Available | Negative | 420675 - 421616 | 35636.3 |
| hypothetical protein | DCP16_02115 | Not Available | Negative | 421620 - 423014 | 52061.6 |
| l,d-transpeptidase | DCP16_02120 | Not Available | Positive | 423466 - 424086 | 22684.6 |
| class ii glutamine amidotransferase | DCP16_02125 | Not Available | Positive | 424197 - 424994 | 28875.5 |
| doxx family protein | DCP16_02130 | Not Available | Positive | 425330 - 425713 | 13642.2 |
| hypothetical protein | DCP16_02135 | Not Available | Negative | 425899 - 427872 | 71528.2 |
| rna helicase | DCP16_02140 | Not Available | Positive | 428293 - 429843 | 55502.8 |
| 5-methylaminomethyl-2-thiouridine methyltransferase | DCP16_02145 | Not Available | Negative | 429941 - 430672 | 27737.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
