Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | DCP16_24235 | Not Available | Negative | 5166289 - 5166902 | 22695.5 |
| hypothetical protein | DCP16_24245 | Not Available | Positive | 5167734 - 5168228 | 18233.8 |
| ti-type conjugative transfer relaxase traa | DCP16_24250 | Not Available | Negative | 5168348 - 5169670 | 49208.5 |
| Large packaging protein | DC425_02515 | Not Available | Positive | 510556 - 511887 | 47204.7 |
| Portal protein | DC425_02520 | Not Available | Positive | 512069 - 513172 | 38348.9 |
| Hypothetical protein | DC425_02525 | Not Available | Positive | 513169 - 513489 | 10991.3 |
| Putative prohead protease | DC425_02530 | Not Available | Positive | 513486 - 513848 | 12828.8 |
| Major capsid protein | DC425_02535 | Not Available | Positive | 513903 - 514904 | 34720.4 |
| hypothetical protein | DC425_02540 | Not Available | Positive | 514978 - 515457 | 16598.2 |
| hypothetical protein | DC425_02545 | Not Available | Positive | 515454 - 515834 | 13063.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
