Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase | DCP16_23600 | Not Available | Positive | 5046443 - 5047186 | 26646.6 |
| hypothetical protein | DCP16_23605 | Not Available | Positive | 5047490 - 5047636 | 5283.43 |
| multidrug efflux rnd transporter permease subunit | DCP16_23610 | Not Available | Negative | 5047824 - 5050913 | 109640.0 |
| efflux transporter periplasmic adaptor subunit | DCP16_23615 | Not Available | Negative | 5050928 - 5052088 | 41217.5 |
| hypothetical protein | DCP16_23620 | Not Available | Positive | 5052159 - 5052371 | 8017.86 |
| mfs transporter | DCP16_23625 | Not Available | Positive | 5052445 - 5053983 | 52432.2 |
| cytochrome b | DCP16_23630 | Not Available | Positive | 5054084 - 5054656 | 21404.9 |
| sh3 domain-containing protein | DCP16_23640 | Not Available | Negative | 5055738 - 5056190 | 16655.2 |
| two-component sensor histidine kinase | DCP16_23645 | Not Available | Negative | 5056414 - 5057445 | 37884.3 |
| dna-binding response regulator | DCP16_23650 | Not Available | Negative | 5057480 - 5058169 | 24953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
