Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-activating lysine-acyltransferase | DCP16_23395 | Not Available | Positive | 4993737 - 4994174 | 16539.8 |
| hlyd family type i secretion periplasmic adaptor subunit | DCP16_23400 | Not Available | Negative | 4994185 - 4995477 | 46960.3 |
| abc transporter | DCP16_23405 | Not Available | Negative | 4995481 - 4997085 | 58099.3 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DCP16_23410 | Not Available | Negative | 4998030 - 4998323 | 10709.0 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | DCP16_23415 | Not Available | Negative | 4998320 - 4998628 | 11089.2 |
| asnc family transcriptional regulator | DCP16_23420 | Not Available | Negative | 4998889 - 4999302 | 14931.2 |
| amino acid abc transporter substrate-binding protein | DCP16_23425 | Not Available | Positive | 4999545 - 5000318 | 27867.8 |
| nickel transporter | DCP16_23430 | Not Available | Positive | 5000492 - 5001154 | 23254.0 |
| amino acid abc transporter permease | DCP16_23435 | Not Available | Positive | 5001151 - 5001807 | 23571.3 |
| polar amino acid abc transporter atp-binding protein | DCP16_23440 | Not Available | Positive | 5001804 - 5002568 | 28155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
