Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | DCP16_23290 | Not Available | Negative | 4967934 - 4968935 | 34708.6 |
| d-xylose abc transporter atp-binding protein | DCP16_23295 | Not Available | Negative | 4968948 - 4970477 | 55478.2 |
| rhamnose abc transporter substrate-binding protein | DCP16_23300 | Not Available | Negative | 4970689 - 4971699 | 35073.3 |
| deor/glpr transcriptional regulator | DCP16_23305 | Not Available | Negative | 4971739 - 4972569 | 30069.2 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | DCP16_23310 | Not Available | Positive | 4972769 - 4974862 | 76289.6 |
| l-rhamnose catabolism isomerase | DCP16_23315 | Not Available | Positive | 4975018 - 4976310 | 47323.5 |
| laci family transcriptional regulator | DCP16_23320 | Not Available | Positive | 4976873 - 4977952 | 38073.6 |
| abc transporter substrate-binding protein | DCP16_23325 | Not Available | Positive | 4977998 - 4979248 | 44228.4 |
| sugar abc transporter permease | DCP16_23330 | Not Available | Positive | 4979314 - 4980246 | 34641.1 |
| carbohydrate abc transporter permease | DCP16_23335 | Not Available | Positive | 4980243 - 4981121 | 31817.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
